Slides in class
(Materials that will be used in class)
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Aug. 20th Introduction
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Aug. 22nd Unix/Linux/MacOSX I
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Aug. 27th Unix/Linux/MacOSX II
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Aug. 29th Unix/Linux/MacOSX III
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Sep. 5th Unix/Linux/MacOSX IV
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Sep. 10th Unix/Linux/MacOSX V
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Sep. 12th Unix/Linux/MacOSX VI
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Sep. 17th Python I
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Sep. 19th Python II
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Sep. 24th Python III
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Sep. 26th BioPythonI
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Oct. 1st BioPythonII (datafiles)
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Oct. 3rd BioPython III (datafiles)
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Oct. 8th BioPython IV
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Oct. 9th Multiple Alignments (datafiles)
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Oct. 22nd Multiple Alignments
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Oct. 24th Next Generation Sequencing
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Oct. 29th Next Generation Sequencing II
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Oct. 31st Next Generation Sequencing III
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Nov. 7st How to use TopHat (extra reading)
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Nov. 12th Differential gene expression
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Nov. 14th Differential gene expression, Pathways, Genomic variations
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Nov. 19th Differential gene expression, Pathways, Genomic variations
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Nov. 29th Promoters